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Title:
Plant genomics : methods and protocols / edited by Wolfgang Busch.
Publisher:
Humana Press,
Copyright Date:
2017
Description:
xi, 317 pages : illustrations (some color) ; 26 cm
Subject:
Plant genomes.
Plant molecular genetics.
Plant genomes--Methodology.--Methodology.
Plant molecular genetics--Methodology.--Methodology.
Laboratory manuals.
Other Authors:
Busch, Wolfgang, editor.
Notes:
Includes bibliographical references and index.
Contents:
Application of chemical genomics to plant-bacteria communication : a high-throughput system to identify novel molecules modulating the induction of bacterial virulence genes by plant signals / Elodie Vandelle, Maria Rita Puttilli, Andrea Chini, Giulia Devescovi, Vittorio Venturi, and Annalisa Polverari. User guide for the LORE1 insertion mutant resource / Terry Mun, Anna Małolepszy, Niels Sandal, Jens Stougaard, and Stig U. Andersen -- Enabling reverse genetics in Medicago truncatula using high-throughput sequencing for Tnt1 flanking sequence recovery / Xiaofei Cheng, Nick Krom, Shulan Zhang, Kirankumar S. Mysore, Michael Udvardi, and Jiangqi Wen -- Generation of doubled haploid lines for QTL mapping / Daniele L. Filiault, Danelle K. Seymour, Ravi Maruthachalam, and Julin N. Maloof -- Assessing distribution and variation of genome-wide DNA methylation using short-read sequencing / Jörg Hagmann and Claude Becker -- Circular chromosome conformation capture in plants / Stefan Grob -- Genome-wide profiling of histone modifications and histone variants in Arabidopsis thaliana and Marchantia polymorpha / Ramesh Yelagandula, Akihisa Osakabe, Elin Axelsson, Frederic Berger, and Tomokazu Kawashima -- Tissue-specific transcriptome profiling in Arabidopsis roots / Erin E. Sparks and Philip N. Benfey -- Sample preparation protocols for protein abundance, acetylome, and phosphoproteome profiling of plant tissues / Gaoyuan Song, Maxwell R. McReynolds, and Justin W. Walley -- Automated high-throughput root phenotyping of Arabidopsis thaliana under nutrient deficiency conditions / Santosh B. Satbhai, Christian Göschl, and Wolfgang Busch -- Large-scale phenotyping of root traits in the model legume Lotus japonicus / Marco Giovannetti, Anna Małolepszy, Christian Göschl, and Wolfgang Busch -- Long-term confocal imaging of Arabidopsis thaliana roots for simultaneous quantification of root growth and fluorescent signals / Delyana Stoeva, Christian Göschl, Bruce Corliss, and Wolfgang Busch -- Identification of protein-DNA interactions using enhanced yeast one-hybrid assays and a semiautomated approach / Allison Gaudinier, Michelle Tang, Anne-Maarit Bågman, and Siobhan M. Brady -- Mapping protein-protein interaction using high-throughput yeast 2-Hybrid / Jessica Lopez and M. Shahid Mukhtar -- Mapping protein-protein interactions using affinity purification and mass spectrometry / Chin-Mei Lee, Christopher Adamchek, Ann Feke, Dmitri A. Nusinow, and Joshua M. Gendron -- Measuring protein movement, oligomerization state, and protein-protein interaction in Arabidopsis roots using scanning fluorescence correlation Spectroscopy (Scanning FCS) / Natalie M. Clark and Rosangela Sozzani -- Studying protein-protein interactions In Planta using advanced fluorescence microscopy / Marc Somssich and Rüdiger Simon -- Chemiluminescence-based detection of peptide activity and peptide-receptor binding in plants / Mari Wildhagen, Markus Albert, and Melinka A. Butenko -- Application of chemical genomics to plant-bacteria communication : a high-throughput system to identify novel molecules modulating the induction of bacterial virulence genes by plant signals / Elodie Vandelle, Maria Rita Puttilli, Andrea Chini, Giulia Devescovi, Vittorio Venturi, and Annalisa Polverari.
Series:
Methods in molecular biology, 1064-3745 ; 1610
Springer protocols, 1949-2448
ISBN:
1493970011
9781493970018
OCLC:
(OCoLC)990748920
Locations:
OVUX522 -- University of Iowa Libraries (Iowa City)

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