Parts characterization for tunable protein expression -- Enzyme nicotinamide cofactor specificity reversal guided by automated structural analysis and library design -- Bacterial genome editing strategy for control of transcription and protein stability -- An Automated Pipeline for Engineering Many-Enzyme Pathways: Computational Sequence Design, Pathway Expression-Flux Mapping, and Scalable Pathway Optimization -- Computational Approaches on Stoichiometric and Kinetic Modeling for Efficient Strain Design -- Extended Metabolic Space Modeling -- Computational Methods to Assess the Production -- Designing and Implementing Algorithmic DNA Assembly Pipelines for Multi-gene Systems -- An adaptive Laboratory Evolution Method to Accelerate Autotrophic Metabolism -- CRISPR-Cas9 toolkit for Actinomycete Genome Editing -- Assembly and Multiplex Genome Integration of Metabolic Pathways in Yeast using CasEMBLR -- A modified Gibson assembly method for cloning large DNA fragments with high GC contents -- Coupling Yeast Golden Gate and VEGAS for efficient assembly of the violacein pathway in Saccharomyces cerevisiae -- Multi-capillary Column Ion Mobility Spectrometry of Volatile Metabolites For Phenotyping Of Microorganisms -- Selection of Highly Expressed Gene Variants in Escherichia coli using Translationally-coupled Antibiotic Selection Markers -- Design, Engineering, and Characterization Of Prokaryotic Ligand-binding Transcriptional Activators as Biosensors in Yeast -- A Capture-SELEX Strategy for Multiplexed Selection of RNA Aptamers against Small Molecules -- High-throughput Microfluidics for the Screening Of Yeast Libraries -- Growth-Coupled Carotenoids Production Using Adaptive Laboratory Evolution -- Two scale 13C Metabolic Flux Analysis for Metabolic Engineering.
Summary:
This volume outlines key steps associated with the design, building, and testing of synthetic metabolic pathways for optimal cell factory performance and robustness, and illustrates how data-driven learning from these steps can be used for rational cost-effective engineering of cell factories with improved performance.
Series:
Methods in molecular biology, 1064-3745 ; 1671 Springer protocols, 1949-2448
This resource is supported by the Institute of Museum and Library Services under the provisions of the Library Services and Technology Act as administered by State Library of Iowa.