Bioinformatics workflows and web services in systems biology made easy for rxperimentalists / Rafael C. Jimenez and Manuel Corpas. Approaches to modeling gene regulatory networks : a gentle introduction / Thomas Schlitt -- Integration of genomic information with biological networks using cytoscape / Anna Bauer-Mehren -- Visualization and analysis of biological networks / Pablo Porras Millan -- Modeling signaling networks with different formalisms : a preview / Aidan MacNamara, David Henriques, and Julio Saez-Rodriguez -- From a biological hypothesis to the construction of a mathematical model / David Cohen ... [et al.] -- Practical use of BiNoM : a biological network manager software / Eric Bonnet ... [et al.] -- Using chemical kinetics to model biochemical pathways / Nicolas Le Novere and Lukas Endler -- Simulation of stochastic kinetic models / Andrew Golightly and Colin S. Gillespie -- BioModels database : a repository of mathematical models of biological processes / Vijayalakshmi Chelliah, Camille Laibe, and Nicolas Le Novere -- Supporting SBML as a model exchange format in software applications / Sarah M. Keating and Nicolas Le Novere -- Controlled annotations for systems biology / Nick Juty, Camille Laibe, and Nicolas Le Novere -- Bayesian approaches for mechanistic ion channel modeling / Ben Calderhead ... [et al.] -- Building models using reactome pathways as templates / David Croft -- Uniform curation protocol of metazoan signaling pathways to predict novel signaling components / Ma te Pa lfy ... [et al.] -- Bioinformatics workflows and web services in systems biology made easy for rxperimentalists / Rafael C. Jimenez and Manuel Corpas.
Series:
Methods in molecular biology, 1064-3745 ; v. 1021 Springer protocols, 1949-2448
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