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Title:
RNA abundance analysis : methods and protocols / edited by Hailing Jin, Walter Gassmann.
Publisher:
Humana Press ;
Copyright Date:
c2012
Description:
xiii, 231 p. : ill. ; 27 cm.
Subject:
RNA--Analysis--Laboratory manuals.
RNA--analysis.
Other Authors:
Jin, Hailing. edt
Gassmann, Walter, 1964-
Notes:
Includes bibliographical references and index.
Contents:
Separating and analyzing sulfur-containing RNAs with Organomercury Gels / Elisa Biondi and Donald H. Burke -- Northern blot analysis for expression profiling of mRNAs and small RNAs / Ankur R. Bhardwaj ... [et al.] -- Construction of RNA-seq libraries from large and microscopic tissues for the illumina sequencing platform / Hagop S. Atamian and Isgouhi Kaloshian -- Strand-specific RNA-seq applied to malaria samples / Nadia Ponts, Duk-Won D. Chung, and Karine G. Le Roch -- RNA in situ hybridization in Arabidopsis / Miin-Feng Wu and Doris Wagner -- Laser microdissection of cells and isolation of high-quality RNA after cryosectioning / Marta Barcala, Carmen Fenoll, and Carolina Escobar -- Detection and quantification of alternative splicing variants using RNA-seq / Douglas W. Bryant Jr, Henry D. Priest, and Todd C. Mockler -- Separating and analyzing sulfur-containing RNAs with Organomercury Gels / Elisa Biondi and Donald H. Burke --
Computational analysis of RNA-seq / Scott A. Givan, Christopher A. Bottoms, and William G. Spollen -- Detection and quantification of viral and satellite RNAs in plant hosts / Sun-Jung Kwon, Jang-Kyun Seo, and A.L.N. Rao -- In situ detection of mature miRNAs in plants using LNA-modified DNA probes / Xiaozhen Yao, Hai Huang, and Lin Xu -- Small RNA isolation and library construction for expression profiling of small RNAs from neurospora and fusarium using illumina high-throughput deep sequencing / Gyungsoon Park and Katherine A. Borkovich -- Isolation and profiling of protein-associated small RNAs / Hongwei Zhao ... [et al.] -- New virus discovery by deep sequencing of small RNAs / Kashmir Singh, Ravneet Kaur, and Wenping Qiu -- Global assembly of expressed sequence tags / Foo Cheung -- Computational analysis of RNA-seq / Scott A. Givan, Christopher A. Bottoms, and William G. Spollen --
Identification of microRNAs and natural antisense transcript-originated endogenous siRNAs from small-RNA deep sequencing data / Weixiong Zhang ... [et al.].
Series:
Methods in molecular biology, 1064-3745 ; v. 883
ISBN:
1617798398 (ebook)
9781617798399 (ebook)
161779838X
9781617798382
OCLC:
(OCoLC)773666130
LCCN:
2012936643
Locations:
OVUX522 -- University of Iowa Libraries (Iowa City)

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